Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024782.1 Corchorus olitorius cultivar O-4 contig24815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28524

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
325--355
6
5.2
6
96
0
53
3
16
67
12
1.35
704--1041
168
2.0
172
84
5
447
30
14
17
37
1.90
1380--1484
54
1.9
56
92
3
178
57
19
5
18
1.60
1603--1634
13
2.5
13
100
0
64
6
0
25
68
1.12
1699--1850
78
1.9
78
97
0
286
25
8
28
37
1.85
1911--2038
66
2.0
62
92
6
211
38
10
15
35
1.83
3086--3192
31
3.5
31
86
0
133
32
25
23
18
1.97
5882--5907
13
2.0
13
100
0
52
53
30
0
15
1.42
7415--7465
22
2.3
22
83
6
59
41
9
9
39
1.71
24178--24603
211
2.0
210
90
0
672
30
23
16
28
1.97

Tables:   1

The End!