Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024793.1 Corchorus olitorius cultivar O-4 contig24826, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24446

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2873--2941
26
2.7
26
97
0
129
36
27
21
14
1.93
4801--4868
31
2.2
31
89
0
100
33
13
19
33
1.90
5769--6011
101
2.4
102
82
8
280
44
9
7
38
1.64
9834--9874
19
2.3
17
84
12
55
78
0
17
4
0.93
11511--11576
20
3.3
21
75
10
66
43
0
1
54
1.09
11517--11603
40
2.1
41
79
10
99
45
2
1
50
1.21
17341--17453
56
2.0
56
100
0
226
31
23
8
35
1.86

Tables:   1

The End!