Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024796.1 Corchorus olitorius cultivar O-4 contig24829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31952

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12794--12883
28
3.3
27
82
3
108
21
17
22
38
1.93
12806--12883
28
2.9
27
84
3
111
19
17
24
38
1.93
13036--13121
44
2.0
44
95
0
154
27
16
15
40
1.88
20242--20279
16
2.4
16
86
0
58
7
42
5
44
1.56
23213--23278
28
2.4
28
86
0
96
36
33
16
13
1.88
24717--25214
40
11.7
40
75
14
347
34
19
27
19
1.95
24796--25301
40
11.6
47
73
14
336
34
18
27
19
1.95
24757--24954
86
2.3
85
87
6
283
33
20
28
17
1.96
24666--25308
40
14.9
44
74
16
316
34
18
27
19
1.95
24924--25308
87
4.4
87
86
1
515
34
17
27
20
1.95
24924--25308
174
2.2
173
89
1
576
34
17
27
20
1.95
25336--25400
32
2.0
32
100
0
130
21
27
10
40
1.87

Tables:   1

The End!