Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024797.1 Corchorus olitorius cultivar O-4 contig24830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35281

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5309--5338
15
1.9
16
93
6
53
20
6
6
66
1.38
8159--8212
19
2.6
21
77
19
60
37
18
3
40
1.69
10641--10676
19
1.9
18
88
5
54
44
2
22
30
1.67
17622--17750
62
2.1
62
95
0
231
24
6
20
47
1.75
21813--21850
2
19.0
2
100
0
76
50
0
0
50
1.00
21923--22203
43
6.6
42
87
5
397
22
9
26
41
1.83
21916--22203
84
3.4
83
91
3
443
22
9
26
41
1.84
24287--24747
40
10.9
41
73
13
235
34
18
27
19
1.95
24498--24751
46
5.8
45
78
10
251
34
18
26
20
1.95
24458--24701
131
1.9
132
87
0
364
34
19
26
20
1.96
24348--24756
86
4.7
85
79
8
398
34
17
28
19
1.95
24695--24814
61
2.0
61
96
0
222
33
14
33
19
1.91
24608--24893
148
1.9
147
94
0
500
33
16
30
19
1.94

Tables:   1

The End!