Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024807.1 Corchorus olitorius cultivar O-4 contig24840, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20261

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3035--3070
19
1.9
18
88
5
54
33
22
2
41
1.68
3035--3081
11
4.7
10
80
17
53
31
21
6
40
1.78
6551--6580
3
10.0
3
100
0
60
33
33
0
33
1.58
8207--8298
21
4.4
21
95
2
159
26
27
18
28
1.98
10645--10670
11
2.4
11
100
0
52
69
7
15
7
1.35
12225--12260
18
2.1
18
89
5
56
38
11
5
44
1.63
16237--16301
25
2.5
27
78
12
73
36
18
10
33
1.86
16231--16410
88
2.0
89
82
9
217
45
15
7
31
1.75
17531--17556
11
2.4
11
100
0
52
69
7
15
7
1.35

Tables:   1

The End!