Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024808.1 Corchorus olitorius cultivar O-4 contig24841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12582

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1531--1566
19
1.9
18
88
5
54
33
22
2
41
1.68
4260--4319
29
2.0
29
83
3
75
21
21
20
36
1.95
4457--4490
17
2.0
17
94
0
59
41
0
8
50
1.34
8276--8392
32
3.7
32
80
2
128
33
20
18
27
1.96
12236--12263
2
14.0
2
100
0
56
50
0
0
50
1.00
12533--12578
1
46.0
1
95
0
74
95
4
0
0
0.26
12533--12580
19
2.6
19
93
6
82
91
8
0
0
0.41

Tables:   1

The End!