Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024812.1 Corchorus olitorius cultivar O-4 contig24845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40743

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3071--3109
2
19.5
2
100
0
78
51
0
0
48
1.00
5789--5842
25
2.2
25
80
12
58
38
11
3
46
1.57
5888--5954
33
2.0
33
94
0
116
40
10
14
34
1.81
7006--7461
178
2.6
178
79
0
444
36
14
15
33
1.88
7964--8034
32
2.2
33
85
7
92
19
29
29
21
1.98
7973--8049
33
2.4
32
82
2
91
16
31
32
19
1.94
13533--13557
13
1.9
13
100
0
50
64
0
0
36
0.94
19528--19584
25
2.4
24
88
5
80
31
5
3
59
1.36
30299--30464
89
1.9
89
88
5
255
31
10
3
54
1.50
35368--35447
39
2.1
39
100
0
160
22
15
10
52
1.71

Tables:   1

The End!