Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024814.1 Corchorus olitorius cultivar O-4 contig24847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30022

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1157--1317
69
2.3
70
89
1
243
20
28
23
27
1.99
1296--1357
22
2.8
22
95
4
108
27
24
30
17
1.97
9255--9292
14
2.5
15
83
12
51
15
26
7
50
1.72
15703--15760
22
2.6
22
100
0
116
29
12
27
31
1.92
15758--15801
22
2.0
22
95
0
79
20
11
18
50
1.77
19671--19764
45
2.2
43
86
7
129
39
21
4
35
1.73
20699--20748
2
24.0
2
92
8
82
48
2
2
48
1.24
21083--21479
207
1.9
203
93
2
686
45
8
10
36
1.69
21533--21579
25
1.9
24
95
4
85
55
8
6
29
1.55
21565--21629
17
3.5
17
69
25
51
40
3
9
47
1.51
21571--21631
18
3.2
18
68
28
54
37
3
8
50
1.48
21570--21650
39
2.0
40
88
2
119
38
4
7
49
1.53
23753--23779
13
2.1
13
100
0
54
55
14
22
7
1.64
25314--25369
20
2.8
20
70
2
51
41
7
3
48
1.48
28091--28143
28
1.9
28
85
11
74
62
11
5
20
1.49

Tables:   1

The End!