Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024815.1 Corchorus olitorius cultivar O-4 contig24848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15094

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--518
22
2.4
19
81
15
55
72
4
18
6
1.22
2242--2292
24
2.1
25
88
3
77
72
3
5
17
1.20
2720--2772
28
1.9
28
85
11
74
62
11
5
20
1.49
3634--3673
19
2.1
19
100
0
80
47
20
7
25
1.75
4275--4305
14
2.2
14
100
0
62
29
16
12
41
1.85
4339--4378
20
2.0
20
90
0
62
25
10
22
42
1.84
10445--10504
21
3.0
21
70
9
61
55
15
13
16
1.70
10956--10994
16
2.4
16
86
0
51
51
2
0
46
1.14
13484--13520
12
2.8
13
88
12
58
37
16
0
45
1.47
13777--13843
21
3.2
21
66
16
57
52
11
1
34
1.48

Tables:   1

The End!