Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024816.1 Corchorus olitorius cultivar O-4 contig24849, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24301

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3744--4061
76
4.2
76
86
0
431
19
38
26
15
1.91
3744--4061
151
2.1
152
86
0
431
19
38
26
15
1.91
4255--4291
2
18.5
2
100
0
74
51
0
0
48
1.00
8741--8784
13
3.1
14
83
9
54
40
9
9
40
1.68
8741--8777
13
2.8
13
91
4
56
43
8
8
40
1.64
10686--10747
16
3.9
16
72
19
58
11
19
32
37
1.87
10684--10754
16
4.5
16
74
10
56
9
21
32
36
1.86
11563--11607
23
2.0
23
81
0
54
17
24
31
26
1.97
11584--11639
16
3.5
16
73
9
51
16
23
30
30
1.96

Tables:   1

The End!