Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024821.1 Corchorus olitorius cultivar O-4 contig24854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13558

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2317--2357
7
5.7
7
94
5
73
87
12
0
0
0.53
2317--2362
22
2.0
23
95
4
85
84
13
2
0
0.71
2894--2974
40
2.0
40
95
0
144
39
14
11
34
1.82
3883--3929
17
2.7
17
83
6
60
38
0
2
59
1.09
4239--4301
33
1.9
33
100
0
126
15
17
15
50
1.78
7278--7351
31
2.4
31
90
0
112
37
12
24
25
1.90
9294--9318
8
3.1
8
100
0
50
12
12
12
64
1.51
9959--9997
18
2.1
19
86
13
55
38
5
17
38
1.72
11254--11416
60
2.7
60
91
1
247
36
19
17
26
1.94
11458--11623
31
5.5
30
67
18
121
27
20
18
33
1.96
11459--11619
60
2.7
60
95
0
277
26
20
18
34
1.95
12861--12930
36
1.9
35
86
11
97
22
11
7
58
1.57

Tables:   1

The End!