Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024822.1 Corchorus olitorius cultivar O-4 contig24855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24838

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
207--252
24
2.0
23
95
4
83
54
4
6
34
1.46
243--323
39
2.0
40
90
2
128
38
3
6
51
1.45
3483--3512
2
15.0
2
100
0
60
50
0
0
50
1.00
4326--4376
17
3.1
16
86
8
66
35
21
21
21
1.96
16839--16863
3
8.3
3
100
0
50
32
0
0
68
0.90

Tables:   1

The End!