Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024832.1 Corchorus olitorius cultivar O-4 contig24865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37442

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358--390
16
2.1
16
94
5
59
15
6
12
66
1.42
8148--8172
13
1.9
13
100
0
50
16
20
8
56
1.65
8672--8710
16
2.4
16
91
0
69
30
7
35
25
1.84
13053--13131
39
2.0
39
97
0
149
46
15
11
26
1.79
20044--20081
2
19.0
2
100
0
76
50
0
0
50
1.00
22271--22375
54
1.9
54
96
3
194
29
3
20
45
1.69
22351--22408
27
2.2
26
82
14
75
41
0
15
43
1.47
22367--22425
27
2.2
27
96
0
109
38
1
15
44
1.56
23049--23073
12
2.1
12
100
0
50
60
8
0
32
1.26
29498--29562
29
2.2
29
86
8
87
55
12
12
20
1.68
33094--33196
51
2.0
50
81
9
120
21
19
13
45
1.84
33741--33785
23
2.0
21
83
8
54
17
11
2
68
1.29

Tables:   1

The End!