Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024854.1 Corchorus olitorius cultivar O-4 contig24887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24196

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
448--602
21
7.4
21
95
1
226
29
18
26
26
1.98
3567--3642
21
3.6
21
96
0
143
28
17
27
26
1.97
3555--3642
42
2.1
42
95
4
160
28
17
28
26
1.97
4421--4836
206
2.0
206
99
0
814
28
22
22
26
1.99
5234--5542
40
7.7
39
75
11
141
41
20
26
12
1.87
5275--5673
80
5.0
79
81
6
367
39
20
26
14
1.90
5333--5673
121
2.8
119
85
5
422
39
19
26
14
1.90
5395--5671
40
6.9
40
88
3
364
37
21
26
14
1.92
9173--9246
26
2.7
27
85
6
105
40
24
14
20
1.90
14208--14246
11
3.6
11
86
6
53
76
2
7
12
1.09

Tables:   1

The End!