Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024856.1 Corchorus olitorius cultivar O-4 contig24889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15119

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1833--1905
31
2.4
31
90
6
114
54
12
2
30
1.51
1840--1948
30
3.6
30
79
7
105
46
12
3
36
1.60
2275--2314
15
2.6
16
88
4
55
62
12
10
15
1.54
7585--7679
27
3.5
27
94
0
163
36
35
17
9
1.83
7921--8205
51
5.6
51
93
1
484
27
26
9
36
1.88
8107--8189
23
3.4
23
66
18
69
19
30
12
38
1.88
7932--8205
152
1.8
151
95
3
462
27
27
9
35
1.88
8426--9005
64
9.1
64
89
1
783
27
22
14
35
1.93
10766--10934
91
1.9
91
92
0
284
26
14
24
34
1.94

Tables:   1

The End!