Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024860.1 Corchorus olitorius cultivar O-4 contig24893, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14260

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--59
2
24.5
2
87
8
71
46
2
0
51
1.13
274--317
16
2.8
16
82
0
61
6
15
38
38
1.75
4149--4241
36
2.6
36
86
3
116
37
15
13
33
1.87
4084--4274
100
1.9
102
83
7
253
35
13
16
34
1.88
4220--4342
33
3.7
33
79
6
140
30
13
18
36
1.90
4317--4437
30
4.0
30
81
8
156
36
17
17
28
1.93
4317--4429
60
1.9
60
90
3
183
35
18
16
29
1.93
7118--7150
4
8.2
4
100
0
66
24
0
0
75
0.80
8133--8173
2
20.5
2
94
0
64
46
0
4
48
1.23
9250--9279
13
2.3
13
94
0
51
23
3
16
56
1.55

Tables:   1

The End!