Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024861.1 Corchorus olitorius cultivar O-4 contig24894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11631

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2320--2346
13
2.1
13
100
0
54
62
14
7
14
1.51
3997--4049
2
28.5
2
78
14
51
47
3
0
49
1.19
3997--4049
11
4.8
11
78
15
56
47
3
0
49
1.19
7101--7141
2
20.5
2
100
0
82
48
0
0
51
1.00
7774--7818
19
2.4
19
96
0
81
28
17
13
40
1.88

Tables:   1

The End!