Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01024866.1 Corchorus olitorius cultivar O-4 contig24899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 14504
ACGTcount: A:0.28, C:0.22, G:0.19, T:0.31
Found at i:2478 original size:20 final size:20
Alignment explanation
Indices: 2440--2481 Score: 57
Period size: 20 Copynumber: 2.1 Consensus size: 20
2430 CCTTGTCTTT
* *
2440 TGGCACCTGAATTCTTGATG
1 TGGCACCTGAACTCGTGATG
*
2460 TGGCACCTGAACTGGTGATG
1 TGGCACCTGAACTCGTGATG
2480 TG
1 TG
2482 TACTAAATGA
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
20 19 1.00
ACGTcount: A:0.19, C:0.19, G:0.31, T:0.31
Consensus pattern (20 bp):
TGGCACCTGAACTCGTGATG
Found at i:4296 original size:130 final size:129
Alignment explanation
Indices: 3807--5087 Score: 1674
Period size: 130 Copynumber: 9.7 Consensus size: 129
3797 TCCAGTTTGG
* * * * *
3807 AAACTAAGAAGGACCTATCTGAGGTCTGAAACTGAAAGA-AAATGACCTGTCTGAGGTCGAAAAA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAA-GACCTGTCTGAGGTCG--AAA
* * * *
3871 TAAAACTGAAACTAAGAAAGACTTGTCTAAGGTCTGGGATTGAAAGATAAAGACCTGTTTGAGGT
63 TAAAACTG------AGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGT
3936 CGAAAAATAAAATA
122 CG--AAAT----TA
* * *
3950 AAACTGAGAAAGACCTGTCTGAGATCTGGGATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTG
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAA-TA
* * * *
4015 AAACTGAGAAGGACCTGTCTGAGTTCTAGAATTGAAAGATAAAGACCTGTCCGAGGTCGAAAAAT
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG--AAAT
4080 AAAAATA
128 -----TA
* * *
4087 AAACTAAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTAAGGTCGAAATTG
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAA-TA
* * *
4152 AAACTGAGCAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACATGTCTGAGTTCGAAATTA
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
* * * *
4217 AAGCTGAGAAGGACTTGTCTGAGGTCTGGAATTGAAAGATAAAGGCCTGTCTGAGGTCGAAATTA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAA-TA
*
4282 AAGCTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
** *
4347 AAGTTGAGAAAGACCTGTTTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATAA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATAA
*
4412 AACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTTGAAA-TA
66 AACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
4475 AAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
* *
4539 AAACTGAAAAAGACCTGTCTGAGG-CCGGAATTTGAAAGAT-AAGACCTGTCTGAGGTCGAAATT
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAA-T
4602 TA
128 TA
*
4604 AAAGCTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAGAGACCTGTCTGAGGTCGAAAT
1 AAA-CTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAAT
*
4668 AAAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACATGTCTGAGGTCGAAAT
64 AAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAAT
4732 TAA
128 T-A
* * *
4735 AAACTGAGAAGGACCTGTCTGAGGTC-GGAAATTGAAAGATAAAGATCTGTTTGAGGTCGAAATA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGG-AATTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
* **
4799 AAACTGAGAAAGACCTGTCTGAGGTC-AGAATTTGAAAGATAAAGAAATGTCTGAGGTCGAAA-T
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAATT
4862 A
129 A
* *
4863 AAACTGAGAAAGACCTGTCTGAGG-CCGGAATTTGAAAGAT-AAGACCTGTCTGAGGTCAAAATT
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAA--
4926 TAAAAGCTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACCTGTCTGAGGTCGAA
63 TAAAA-CTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAA
4990 A-TA
126 ATTA
*
4993 AAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACATGTCTGAGGTCGAAATA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
* * *
5057 AAACTAAGGAAGACCTGTCTGAGGCCTGGAA
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA
5088 CTTCGAAATC
Statistics
Matches: 1046, Mismatches: 72, Indels: 54
0.89 0.06 0.05
Matches are distributed among these distances:
127 50 0.05
128 145 0.14
129 82 0.08
130 487 0.47
131 47 0.04
135 4 0.00
136 51 0.05
137 119 0.11
141 3 0.00
142 7 0.01
143 48 0.05
144 3 0.00
ACGTcount: A:0.38, C:0.13, G:0.26, T:0.23
Consensus pattern (129 bp):
AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATAA
AACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
Found at i:4452 original size:64 final size:64
Alignment explanation
Indices: 3945--5087 Score: 1597
Period size: 64 Copynumber: 17.6 Consensus size: 64
3935 TCGAAAAATA
* *
3945 AAATAAAACTGAGAAAGACCTGTCTGAGATCTGGGATTGAAAGATAAAGACCTGTCTGAGGTCG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
* * * * *
4009 AAATTGAAACTGAGAAGGACCTGTCTGAGTTCTAGAATTGAAAGATAAAGACCTGTCCGAGGTCG
1 AAA-TAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
*
4074 AAAAATAAAAATAAAACTAAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCT
1 --------AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCT
*
4139 AAGGTCG
58 GAGGTCG
* * * *
4146 AAATTGAAACTGAGCAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACATGTCTGAGTTCG
1 AAA-TAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
* * * *
4211 AAATTAAAGCTGAGAAGGACTTGTCTGAGGTCTGGAATTGAAAGATAAAGGCCTGTCTGAGGTCG
1 AAA-TAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
*
4276 AAATTAAAGCTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
1 AAA-TAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
** *
4341 AAATTAAAGTTGAGAAAGACCTGTTTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
1 AAA-TAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
*
4406 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTTG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
4470 AAATAAAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACCTGTCTGAGGTCG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCG
* *
4534 AAATAAAACTGAAAAAGACCTGTCTGAGG-CCGGAATTTGAAAGAT-AAGACCTGTCTGAGGTCG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCG
*
4597 AAATTTAAAAGCTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAGAGACCTGTCTGAGG
1 AAA--TAAAA-CTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGG
4661 TCG
62 TCG
*
4664 AAATAAAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACATGTCTGAGGTCG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCG
* * *
4728 AAATTAAAAACTGAGAAGGACCTGTCTGAGGTC-GGAAATTGAAAGATAAAGATCTGTTTGAGGT
1 AAA-T-AAAACTGAGAAAGACCTGTCTGAGGTCTGG-AATTGAAAGATAAAGACCTGTCTGAGGT
4792 CG
63 CG
* **
4794 AAATAAAACTGAGAAAGACCTGTCTGAGGTC-AGAATTTGAAAGATAAAGAAATGTCTGAGGTCG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCG
* *
4858 AAATAAAACTGAGAAAGACCTGTCTGAGG-CCGGAATTTGAAAGAT-AAGACCTGTCTGAGGTCA
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCG
4921 AAATTTAAAAGCTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACCTGTCTGAGG
1 AAA--TAAAA-CTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGG
4985 TCG
62 TCG
*
4988 AAATAAAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACATGTCTGAGGTCG
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCG
* * *
5052 AAATAAAACTAAGGAAGACCTGTCTGAGGCCTGGAA
1 AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAA
5088 CTTCGAAATC
Statistics
Matches: 991, Mismatches: 60, Indels: 55
0.90 0.05 0.05
Matches are distributed among these distances:
63 47 0.05
64 397 0.40
65 321 0.32
66 125 0.13
67 44 0.04
72 54 0.05
73 3 0.00
ACGTcount: A:0.38, C:0.13, G:0.26, T:0.23
Consensus pattern (64 bp):
AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG
Found at i:4621 original size:194 final size:192
Alignment explanation
Indices: 3807--5087 Score: 1637
Period size: 194 Copynumber: 6.5 Consensus size: 192
3797 TCCAGTTTGG
* * * * *
3807 AAACTAAGAAGGACCTATCTGAGGTCTGAAACTGAAAGA-AAATGACCTGTCTGAGGTCGAAAAA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAA-GACCTGTCTGAGGTCG--AAA
* * * *
3871 TAAAACTGAAACTAAGAAAGACTTGTCTAAGGTCTGGGATTGAAAGATAAAGACCTGTTTGAGGT
63 TAAAACTG------AGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGT
* * *
3936 CGAAAAATAAAATAAAACTGAGAAAGACCTGTCTGAGATCTGGGATTGAAAGATAAAGACCTGTC
122 CG--AAAT----TAAAACTGAGAAAGACCTGTCTGAG-GCCGGAATTGAAAGATAAAGACCTGTC
*
4001 TGAGGTCGAAATTG
180 TGAGGTCGAAA-TA
* * * *
4015 AAACTGAGAAGGACCTGTCTGAGTTCTAGAATTGAAAGATAAAGACCTGTCCGAGGTCGAAAAAT
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCG------
* *
4080 AAAAATAAAACTAAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTAAGGTC
60 --AAATAAAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTC
* * * * *
4145 GAAATTGAAACTGAGCAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACATGTCTGAGTTC
123 GAAATTAAAACTGAGAAAGACCTGTCTGAGG-CCGGAATTGAAAGATAAAGACCTGTCTGAGGTC
4210 GAAATTA
187 GAAA-TA
* * * *
4217 AAGCTGAGAAGGACTTGTCTGAGGTCTGGAATTGAAAGATAAAGGCCTGTCTGAGGTCGAAATTA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAA-TA
*
4282 AAGCTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
** * *
4347 AAGTTGAGAAAGACCTGTTTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
130 AAACTGAGAAAGACCTGTCTGAGG-CCGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
*
4411 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTTGAAATAA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATAA
4476 AACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACCTGTCTGAGGTCGAAA-TA
66 AACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAATTA
*
4539 AAACTGAAAAAGACCTGTCTGAGGCCGGAATTTGAAAGAT-AAGACCTGTCTGAGGTCGAAATTT
130 AAACTGAGAAAGACCTGTCTGAGGCCGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAA--T
4603 A
192 A
*
4604 AAAGCTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAGAGACCTGTCTGAGGTCGAAAT
1 AAA-CTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAAT
*
4668 AAAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACATGTCTGAGGTCGAAAT
64 AAAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAAT
* * * *
4732 TAAAAACTGAGAAGGACCTGTCTGAGGTCGGAAATTGAAAGATAAAGATCTGTTTGAGGTCGAAA
128 T-AAAACTGAGAAAGACCTGTCTGAGGCCGG-AATTGAAAGATAAAGACCTGTCTGAGGTCGAAA
4797 TA
191 TA
* **
4799 AAACTGAGAAAGACCTGTCTGAGGTC-AGAATTTGAAAGATAAAGAAATGTCTGAGGTCGAAATA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
* *
4863 AAACTGAGAAAGACCTGTCTGAGG-CCGGAATTTGAAAGAT-AAGACCTGTCTGAGGTCAAAATT
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAA-T
*
4926 TAAAAGCTGAGAAAGACCTGTCTGAGGTCGGAATTTGAAAGATAAAGACCTGTCTGAGGTCGAAA
128 TAAAA-CTGAGAAAGACCTGTCTGAGGCCGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAA
4991 TA
191 TA
*
4993 AAACTGAGAAAGACCTGTCTGAGGTC-GGAATTTGAAAGATAAAGACATGTCTGAGGTCGAAATA
1 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA-TTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
* * *
5057 AAACTAAGGAAGACCTGTCTGAGGCCTGGAA
65 AAACTGAGAAAGACCTGTCTGAGGTCTGGAA
5088 CTTCGAAATC
Statistics
Matches: 980, Mismatches: 69, Indels: 61
0.88 0.06 0.05
Matches are distributed among these distances:
191 26 0.03
192 35 0.04
193 93 0.09
194 413 0.42
195 130 0.13
196 35 0.04
197 21 0.02
202 112 0.11
206 4 0.00
208 96 0.10
209 3 0.00
214 12 0.01
ACGTcount: A:0.38, C:0.13, G:0.26, T:0.23
Consensus pattern (192 bp):
AAACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATAA
AACTGAGAAAGACCTGTCTGAGGTCTGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATTAA
AACTGAGAAAGACCTGTCTGAGGCCGGAATTGAAAGATAAAGACCTGTCTGAGGTCGAAATA
Found at i:14016 original size:29 final size:30
Alignment explanation
Indices: 13955--14027 Score: 85
Period size: 29 Copynumber: 2.5 Consensus size: 30
13945 GTACCCGGGA
**
13955 GGTCCCTGTACTATACGATTTGTGCAATTT
1 GGTCCCTGTACTATACGATTTGTGCAAAAT
***
13985 GGTCCCTGTACTAT-TTTTTTGTGCAAAAT
1 GGTCCCTGTACTATACGATTTGTGCAAAAT
*
14014 GGTCCCTTTACTAT
1 GGTCCCTGTACTAT
14028 CAAAAGTGAT
Statistics
Matches: 37, Mismatches: 6, Indels: 1
0.84 0.14 0.02
Matches are distributed among these distances:
29 23 0.62
30 14 0.38
ACGTcount: A:0.19, C:0.21, G:0.18, T:0.42
Consensus pattern (30 bp):
GGTCCCTGTACTATACGATTTGTGCAAAAT
Found at i:14197 original size:21 final size:22
Alignment explanation
Indices: 14161--14202 Score: 68
Period size: 21 Copynumber: 2.0 Consensus size: 22
14151 CAAAAAATCA
*
14161 AAAATGTATTTTTTTAAAATAT
1 AAAATGTATTTATTTAAAATAT
14183 AAAAT-TATTTATTTAAAATA
1 AAAATGTATTTATTTAAAATA
14203 AAGAATTTTT
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
21 14 0.74
22 5 0.26
ACGTcount: A:0.50, C:0.00, G:0.02, T:0.48
Consensus pattern (22 bp):
AAAATGTATTTATTTAAAATAT
Found at i:14209 original size:21 final size:20
Alignment explanation
Indices: 14154--14209 Score: 67
Period size: 21 Copynumber: 2.6 Consensus size: 20
14144 AAAAAATCAA
*
14154 AAAATCAAAAATGTATTTTTTT
1 AAAAT-AAAAAT-TATTTATTT
14176 AAAATATAAAATTATTTATTT
1 AAAATA-AAAATTATTTATTT
14197 AAAATAAAGAATT
1 AAAATAAA-AATT
14210 TTTTTTCTTA
Statistics
Matches: 31, Mismatches: 1, Indels: 5
0.84 0.03 0.14
Matches are distributed among these distances:
20 2 0.06
21 19 0.61
22 10 0.32
ACGTcount: A:0.54, C:0.02, G:0.04, T:0.41
Consensus pattern (20 bp):
AAAATAAAAATTATTTATTT
Done.