Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024867.1 Corchorus olitorius cultivar O-4 contig24900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8036

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
163--204
20
2.1
20
86
0
57
19
19
30
30
1.96
1444--1652
22
9.6
23
72
14
97
39
10
15
34
1.82
1488--1649
85
1.9
87
81
3
202
39
10
14
35
1.81
1804--1856
23
2.3
23
90
3
81
45
9
15
30
1.77
1733--2165
22
19.6
22
71
9
222
36
10
16
35
1.84
1802--1917
61
1.9
61
89
3
180
40
7
17
34
1.78
2212--2266
22
2.5
22
85
8
67
41
9
18
30
1.81
4031--4073
22
1.9
23
95
4
79
25
18
13
41
1.88
4669--4899
23
10.0
23
88
0
327
51
25
4
18
1.65

Tables:   1

The End!