Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024873.1 Corchorus olitorius cultivar O-4 contig24906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13787

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4410--4510
50
2.0
50
94
0
175
34
11
16
36
1.86
4795--4853
6
9.2
6
82
17
66
15
15
0
69
1.19
4789--4850
13
4.6
14
86
13
94
14
14
0
70
1.16
4789--4864
20
3.8
18
75
25
64
14
14
0
71
1.16
5159--5212
13
4.2
13
85
7
74
20
22
1
55
1.53
6050--6201
75
2.0
75
90
0
241
30
23
8
36
1.85
10994--11158
34
4.6
34
79
11
170
38
19
15
27
1.91
10994--11158
70
2.3
71
83
6
208
38
19
15
27
1.91
11966--12079
56
2.0
56
94
0
201
34
23
1
40
1.65
12144--12224
42
1.9
42
97
0
153
29
7
16
46
1.73

Tables:   1

The End!