Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024898.1 Corchorus olitorius cultivar O-4 contig24931, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14279

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187--574
205
1.9
202
96
1
722
44
8
11
35
1.72
3406--3509
36
2.8
36
86
5
138
6
40
37
15
1.74
5997--6238
86
2.8
86
93
0
403
40
13
9
36
1.77
6293--6325
14
2.3
15
89
5
50
51
3
0
45
1.16
6759--6784
2
13.0
2
100
0
52
50
0
0
50
1.00
10027--10093
21
3.2
21
64
16
57
50
14
5
28
1.66
10014--10094
42
1.9
42
97
0
153
46
16
7
29
1.73
10709--10773
34
1.9
34
96
0
121
15
20
32
32
1.93
10867--10924
17
3.4
16
79
11
71
27
22
18
31
1.97

Tables:   1

The End!