Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024899.1 Corchorus olitorius cultivar O-4 contig24932, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15947

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2192--2648
178
2.6
177
85
1
594
34
14
15
35
1.88
4155--4686
22
24.4
22
70
11
218
35
17
11
35
1.86
4155--4347
43
4.4
43
75
7
158
38
17
11
32
1.86
4155--4347
65
3.0
65
77
9
187
38
17
11
32
1.86
4491--4702
66
3.2
66
81
4
248
33
15
11
40
1.82
11679--11706
13
2.2
13
100
0
56
25
21
0
53
1.46
11915--11952
16
2.3
17
86
4
51
34
0
2
63
1.09

Tables:   1

The End!