Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024909.1 Corchorus olitorius cultivar O-4 contig24942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28900

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1940--2356
154
2.7
153
88
4
542
29
18
36
15
1.91
1986--2356
154
2.4
154
92
2
617
28
18
37
15
1.92
6402--6445
21
2.1
21
83
8
54
31
2
0
65
1.05
15781--15877
50
1.9
50
97
0
185
32
17
11
38
1.85
16531--16588
25
2.3
25
96
0
107
31
36
18
13
1.90
26111--26226
56
2.1
57
93
1
198
33
24
1
40
1.65
27833--27857
13
1.9
13
100
0
50
56
0
0
44
0.99
28858--28900
2
21.0
2
95
4
77
48
2
0
48
1.14

Tables:   1

The End!