Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002491.1 Corchorus olitorius cultivar O-4 contig02491, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1530

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247--297
17
3.2
17
70
30
58
49
13
0
37
1.43
241--303
30
2.1
30
100
0
126
50
12
0
36
1.41
253--315
17
4.0
17
73
24
66
47
12
1
38
1.51
305--340
18
2.0
18
100
0
72
33
16
0
50
1.46
344--457
20
5.9
20
73
12
85
28
3
3
64
1.27
329--507
76
2.3
77
95
1
315
29
4
2
63
1.26
513--545
16
2.1
16
94
0
57
36
6
3
54
1.41
525--578
24
2.3
24
81
12
69
46
3
0
50
1.19
542--612
16
4.6
16
67
19
53
45
4
2
47
1.36
535--586
24
2.2
24
82
6
61
48
1
0
50
1.12
715--748
15
2.2
16
94
5
61
61
0
5
32
1.20

Tables:   1

The End!