Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024910.1 Corchorus olitorius cultivar O-4 contig24943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17551

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1259--1287
2
14.5
2
100
0
58
51
0
0
48
1.00
2123--2168
21
2.2
21
88
7
67
41
8
21
28
1.83
3234--3295
28
2.2
28
97
0
115
30
16
16
37
1.90
8291--8419
43
3.0
43
95
0
231
35
13
14
36
1.85
9679--9718
20
2.0
20
85
0
53
10
5
10
75
1.19
9989--10123
56
2.4
55
91
6
218
25
13
17
43
1.85
16145--16206
28
2.3
27
83
13
90
20
16
41
20
1.90

Tables:   1

The End!