Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024911.1 Corchorus olitorius cultivar O-4 contig24944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30289

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10350--10392
20
2.2
20
100
0
86
32
13
25
27
1.94
13561--13611
15
3.4
15
83
0
66
19
17
23
39
1.92
14716--14797
25
3.0
28
73
12
98
35
20
12
31
1.90
14704--14786
25
3.2
25
74
12
94
36
24
9
30
1.87
18621--18664
22
2.0
22
90
0
70
52
11
20
15
1.74
20249--20308
31
1.9
31
86
0
84
16
15
11
56
1.67
21760--21799
18
2.2
18
86
4
53
45
5
20
30
1.72
22385--22420
18
2.1
17
94
5
63
11
16
8
63
1.49
26147--26219
38
1.9
38
94
2
130
52
9
6
31
1.60
28332--28578
129
1.9
129
99
0
485
23
19
16
40
1.90
28785--28822
10
3.8
10
89
0
58
0
47
0
52
1.00
28794--28823
5
6.0
5
92
0
51
0
43
0
56
0.99
30256--30289
2
17.0
2
100
0
68
50
0
0
50
1.00

Tables:   1

The End!