Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002842.1 Corchorus olitorius cultivar O-4 contig02844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1716

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1055--1083
15
1.9
15
100
0
58
41
6
10
41
1.66
1220--1283
27
2.2
30
81
10
80
23
12
0
64
1.28
1217--1273
7
8.1
7
78
5
62
24
12
0
63
1.29
1211--1282
14
5.1
14
81
10
76
23
11
0
65
1.25
1231--1288
22
2.6
22
76
13
57
27
10
0
62
1.28
1290--1318
14
2.1
14
100
0
58
37
0
13
48
1.43
1356--1380
12
2.1
12
100
0
50
40
0
16
44
1.47
1354--1400
13
3.6
13
83
13
53
34
2
14
48
1.56

Tables:   1

The End!