Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01003025.1 Corchorus olitorius cultivar O-4 contig03030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1800

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--619
22
6.9
22
75
4
144
35
9
13
41
1.76
469--619
66
2.3
65
85
5
189
35
9
13
41
1.76
699--770
21
3.3
21
74
16
67
37
8
16
37
1.79
678--770
43
2.1
44
80
9
102
35
6
17
40
1.75
678--805
22
5.9
22
74
12
93
31
6
20
42
1.77
1578--1627
3
16.7
3
100
0
100
66
0
0
34
0.92

Tables:   1

The End!