Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01003620.1 Corchorus olitorius cultivar O-4 contig03628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1364

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
552--592
7
5.9
7
82
0
55
19
14
48
17
1.81
542--602
28
2.2
28
87
0
86
22
9
44
22
1.82
642--701
7
8.6
7
78
7
59
40
33
1
25
1.66
648--715
28
2.4
28
85
0
91
39
38
2
19
1.67
664--757
21
4.5
21
78
0
98
38
40
4
17
1.69
699--731
14
2.4
14
100
0
66
36
51
6
6
1.51

Tables:   1

The End!