Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000365.1 Corchorus olitorius cultivar O-4 contig00365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6472

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230--257
2
14.0
2
100
0
56
50
0
0
50
1.00
2822--2926
31
3.4
31
83
0
147
33
26
23
16
1.96
6320--6356
19
2.0
19
94
5
67
29
0
21
48
1.50
6437--6472
2
18.0
2
94
0
63
50
0
2
47
1.15

Tables:   1

The End!