Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01004102.1 Corchorus olitorius cultivar O-4 contig04115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1158

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318--356
18
2.2
18
100
0
78
41
5
7
46
1.55
411--449
10
4.0
10
93
6
71
61
7
10
20
1.52
411--448
19
2.0
19
100
0
76
63
5
10
21
1.46
796--856
20
3.0
20
97
2
113
63
6
9
19
1.46
876--917
21
2.0
22
95
4
77
30
9
2
57
1.44

Tables:   1

The End!