Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01004299.1 Corchorus olitorius cultivar O-4 contig04312, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2145

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
255--333
42
2.0
40
85
7
106
31
25
36
6
1.81
566--642
24
3.2
24
77
3
66
36
25
33
3
1.75
611--709
48
2.0
50
82
3
121
43
18
33
5
1.72
629--711
24
3.5
24
80
4
87
44
16
33
4
1.69
725--809
24
3.5
24
83
0
89
38
25
30
4
1.76
670--807
48
2.9
48
71
2
116
36
24
32
5
1.79

Tables:   1

The End!