Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01004505.1 Corchorus olitorius cultivar O-4 contig04521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1176

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94--218
61
2.0
61
86
3
171
32
24
1
41
1.64
426--465
8
5.0
8
85
11
55
37
0
0
62
0.95
426--465
17
2.5
17
88
8
57
37
0
0
62
0.95
508--563
8
6.6
8
79
16
60
26
0
12
60
1.32
507--563
18
3.2
18
92
0
96
28
0
12
59
1.33
493--563
36
1.9
38
88
5
110
30
0
11
57
1.34

Tables:   1

The End!