Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000058.1 Corchorus olitorius cultivar O-4 contig00058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1005

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
344--381
9
4.0
10
86
10
53
0
21
0
78
0.74
344--381
5
8.0
5
82
11
53
0
21
0
78
0.74
354--391
16
2.3
17
86
4
51
2
23
0
73
0.95
408--441
6
5.5
6
89
3
50
5
17
0
76
0.98
408--443
18
1.9
18
94
5
63
8
16
0
75
1.04
362--483
46
2.6
46
85
11
151
6
19
9
63
1.46
551--592
22
1.9
22
85
0
57
9
42
40
7
1.65

Tables:   1

The End!