Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006006.1 Corchorus olitorius cultivar O-4 contig06031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6380

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
348--429
30
2.7
31
94
3
148
31
15
10
41
1.82
583--656
29
2.5
30
86
4
96
44
13
17
24
1.85
1222--1290
3
21.3
3
88
8
84
59
0
0
40
0.97
1222--1298
31
2.4
31
87
8
102
59
0
1
38
1.06
2403--2527
60
2.0
62
95
4
227
24
15
17
42
1.88

Tables:   1

The End!