Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006043.1 Corchorus olitorius cultivar O-4 contig06068, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1025

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--142
22
6.1
21
75
11
65
41
5
15
37
1.70
43--318
43
6.3
44
72
12
167
35
10
16
37
1.82
175--279
46
2.3
44
80
3
111
36
14
14
35
1.86
43--318
44
6.3
43
72
14
163
35
10
16
37
1.82
43--318
22
12.6
21
70
13
148
35
10
16
37
1.82
340--473
22
6.2
21
66
16
69
41
8
13
36
1.76

Tables:   1

The End!