Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006114.1 Corchorus olitorius cultivar O-4 contig06139, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1336

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
621--990
19
17.6
19
69
23
101
51
2
18
27
1.58
640--814
26
7.5
25
63
26
71
50
2
18
28
1.61
616--866
45
5.5
45
90
4
371
51
2
18
27
1.60
616--866
92
2.8
90
89
4
378
51
2
18
27
1.60
774--859
26
3.6
25
74
19
101
50
1
18
30
1.55
846--990
37
3.9
38
84
8
185
51
1
18
28
1.54
846--985
56
2.5
56
81
7
162
51
1
19
27
1.55
888--1031
37
3.8
38
86
8
120
52
0
20
27
1.46
982--1143
25
6.2
27
69
24
80
49
0
19
30
1.53
1017--1162
28
5.4
29
75
21
165
46
0
19
32
1.55
998--1177
53
3.4
53
92
1
308
48
0
19
31
1.53
1157--1197
20
2.0
21
95
4
75
58
0
12
29
1.34
1274--1336
28
2.2
28
83
8
83
49
3
23
23
1.65

Tables:   1

The End!