Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006120.1 Corchorus olitorius cultivar O-4 contig06145, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2264

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--767
109
2.1
105
90
4
353
44
8
7
39
1.64
1318--1349
15
2.1
15
100
0
64
31
25
0
43
1.55
1348--1451
51
2.0
51
100
0
208
30
19
13
36
1.90
1437--1550
58
2.0
58
100
0
228
28
22
15
33
1.95

Tables:   1

The End!