Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006128.1 Corchorus olitorius cultivar O-4 contig06153, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2392

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--385
20
3.0
21
80
13
67
47
9
17
25
1.77
324--488
22
7.6
23
70
15
111
40
9
14
35
1.79
1779--1871
45
2.1
45
89
4
143
41
10
17
30
1.83
2100--2244
22
6.6
22
78
7
80
42
8
17
31
1.79
2101--2183
21
4.0
20
80
7
67
46
6
21
25
1.74
2122--2307
22
8.5
22
76
12
134
40
9
15
35
1.79
2365--2390
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!