Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006155.1 Corchorus olitorius cultivar O-4 contig06180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1110

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
291--539
4
63.8
4
65
16
103
67
1
6
24
1.23
290--429
23
5.8
27
65
28
91
65
1
7
26
1.27
278--533
46
5.6
46
89
3
333
66
1
7
25
1.23
306--508
19
10.5
19
65
21
66
66
1
7
25
1.26
385--440
27
2.1
27
83
6
69
67
1
3
26
1.16
364--538
11
16.1
10
70
19
79
69
0
6
24
1.16

Tables:   1

The End!