Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000616.1 Corchorus olitorius cultivar O-4 contig00616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1390

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
122--199
29
2.7
29
83
0
102
42
23
14
20
1.88
224--253
14
2.1
14
100
0
60
53
6
6
33
1.53
474--954
35
13.7
35
90
3
686
29
20
19
30
1.97
971--1100
50
2.6
50
92
1
206
29
12
28
30
1.93
1150--1275
50
2.5
49
87
7
173
24
25
11
38
1.90

Tables:   1

The End!