Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006207.1 Corchorus olitorius cultivar O-4 contig06232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1423

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
503--560
6
10.2
6
82
16
70
31
13
0
55
1.39
502--560
21
2.6
22
84
10
75
30
15
0
54
1.42
575--650
23
3.2
22
67
26
57
47
10
3
38
1.57
580--659
24
3.2
25
70
20
78
43
13
3
38
1.62
574--671
48
2.0
48
98
0
187
46
11
4
37
1.59
983--1017
17
2.1
17
94
0
61
25
5
0
68
1.11
1059--1085
14
1.9
14
100
0
54
29
3
0
66
1.09
1062--1118
18
3.2
18
79
16
66
29
1
0
68
1.00

Tables:   1

The End!