Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006208.1 Corchorus olitorius cultivar O-4 contig06233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5431

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3364--3394
2
15.5
2
100
0
62
51
0
0
48
1.00
3630--3701
31
2.3
31
75
17
78
26
4
8
61
1.43
3913--3969
5
11.8
5
72
20
50
40
0
3
56
1.17
3913--3969
13
3.9
14
78
17
71
40
0
3
56
1.17
3913--3969
22
2.6
23
77
8
73
40
0
3
56
1.17
3913--3969
9
6.4
9
73
18
57
40
0
3
56
1.17
3914--3985
11
7.2
10
76
17
53
43
2
2
51
1.30
4126--4183
16
3.6
16
81
9
82
37
41
15
5
1.70
4126--4197
32
2.2
32
92
0
126
36
43
13
6
1.72
4126--4197
16
4.5
16
79
10
76
36
43
13
6
1.72

Tables:   1

The End!