Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006254.1 Corchorus olitorius cultivar O-4 contig06279, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1372

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--222
11
10.8
11
68
9
67
50
1
3
43
1.29
338--362
10
2.5
10
100
0
50
52
16
8
24
1.70
688--767
38
2.0
40
92
4
137
51
8
2
37
1.47
758--804
25
1.9
24
95
4
85
29
6
8
55
1.55
847--1256
203
2.0
202
95
2
734
36
10
8
44
1.71

Tables:   1

The End!