Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006262.1 Corchorus olitorius cultivar O-4 contig06287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1160

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--146
37
3.7
38
73
4
120
23
18
13
44
1.84
6--144
74
1.9
74
90
0
224
24
17
12
45
1.83
167--209
18
2.4
16
79
20
50
25
16
6
51
1.69
170--206
18
1.9
19
89
10
58
27
18
5
48
1.70
241--500
54
4.8
54
88
4
348
27
15
21
35
1.94
241--486
108
2.3
108
92
1
395
27
15
22
34
1.94
604--681
33
2.4
33
91
0
120
43
17
6
32
1.75
834--1160
7
46.7
7
98
0
636
56
14
0
28
1.39

Tables:   1

The End!