Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006338.1 Corchorus olitorius cultivar O-4 contig06363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1454

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--177
19
1.9
18
88
5
54
30
5
0
63
1.17
163--235
19
3.8
19
74
13
62
26
8
0
65
1.20
158--218
27
2.3
27
88
5
88
27
6
0
65
1.17
137--265
46
2.9
46
89
5
187
27
7
0
64
1.26
162--241
23
3.3
25
73
19
80
27
7
0
65
1.20
280--345
24
2.8
24
75
11
73
25
18
1
54
1.52

Tables:   1

The End!