Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006369.1 Corchorus olitorius cultivar O-4 contig06394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1652

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179--260
31
2.7
30
86
7
112
26
13
7
52
1.66
514--543
2
15.5
2
93
6
53
50
0
0
50
1.00
694--774
35
2.2
37
82
8
96
59
6
6
28
1.46
694--774
36
2.2
36
83
12
96
59
6
6
28
1.46
837--874
14
2.7
14
91
0
58
31
7
21
39
1.82
970--1030
32
1.9
32
90
6
97
26
18
6
49
1.71

Tables:   1

The End!