Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000652.1 Corchorus olitorius cultivar O-4 contig00652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11175

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3103--3155
21
2.5
21
78
6
63
49
5
1
43
1.37
3116--3159
18
2.4
18
81
7
54
50
6
2
40
1.42
3142--3191
24
2.1
24
92
0
82
50
0
8
42
1.32
3221--3334
56
2.0
57
94
1
203
38
6
9
45
1.62
3460--3506
2
24.0
2
84
4
60
55
0
2
42
1.12
3460--3514
12
4.5
12
81
2
56
56
1
1
40
1.21
5871--6016
78
1.9
79
92
2
251
50
0
10
38
1.41
9216--9248
2
17.5
2
87
12
52
48
0
0
51
1.00
9216--9248
17
1.9
17
93
0
57
48
0
0
51
1.00
10034--10085
25
2.2
23
83
10
70
51
15
5
26
1.65
10119--10143
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!