Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006523.1 Corchorus olitorius cultivar O-4 contig06548, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1603

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--300
128
2.3
128
93
1
494
26
21
18
33
1.96
632--732
53
1.9
53
81
0
121
23
17
17
40
1.91
727--810
43
2.0
43
86
6
118
20
13
19
47
1.82
753--846
43
2.2
43
82
0
107
18
17
22
42
1.89
831--924
43
2.2
43
84
3
118
27
14
14
42
1.86

Tables:   1

The End!