Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006579.1 Corchorus olitorius cultivar O-4 contig06604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4138

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2302--2375
29
2.5
30
88
4
105
24
18
13
43
1.86
2519--2612
31
3.1
31
90
1
136
41
10
14
32
1.81
2657--2699
7
6.0
7
89
5
68
0
16
0
83
0.64
2656--2691
8
4.5
8
89
10
56
0
13
0
86
0.58
2656--2699
15
3.0
15
93
3
72
0
15
0
84
0.63
2657--2698
22
1.9
22
95
0
75
0
14
0
85
0.59
2787--3024
125
1.9
125
85
3
327
52
1
10
34
1.46
3649--3714
31
2.1
31
88
2
96
33
13
9
43
1.76
3810--3877
29
2.3
31
84
5
86
50
11
11
26
1.73

Tables:   1

The End!